Report which colony events have occurred

Source: R/Functions_L0_auxilary.R

Level 0 function that returns a matrix of logicals reporting the status of the colony events. The events are: split, swarm, supersedure, collapse, and production. These events impact colony status, strength, and could also impact downstream phenotypes.

getEvents(x)

Value

matrix of logicals, named by colony id when x is

MultiColony-class

Examples

founderGenomes <- quickHaplo(nInd = 8, nChr = 1, segSites = 100)
SP <- SimParamBee$new(founderGenomes)
SP$nThreads = 1L
basePop <- createVirginQueens(founderGenomes)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found

drones <- createDrones(x = basePop[1], nInd = 1000)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
droneGroups <- pullDroneGroupsFromDCA(drones, n = 10, nDrones = nFathersPoisson)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found

# Create a Colony and a MultiColony class
colony <- createColony(x = basePop[2])
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
colony <- cross(colony, drones = droneGroups[[1]])
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
colony <- buildUp(x = colony, nWorkers = 6, nDrones = 3)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
colony <- addVirginQueens(colony, nInd = 5)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found

apiary <- createMultiColony(basePop[3:4], n = 2)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
apiary <- cross(apiary, drones = droneGroups[c(2, 3)])
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
apiary <- buildUp(x = apiary, nWorkers = 6, nDrones = 3)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
apiary <- addVirginQueens(apiary, nInd = 4)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found

getEvents(colony)
#> Error in eval(expr, envir, enclos): object 'colony' not found
getEvents(apiary)
#> Error in eval(expr, envir, enclos): object 'apiary' not found

tmp <- swarm(colony)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
getEvents(tmp$swarm)
#> Error in eval(expr, envir, enclos): object 'tmp' not found
getEvents(tmp$remnant)
#> Error in eval(expr, envir, enclos): object 'tmp' not found

apiary <- supersede(apiary)
#> Error in get(x = "SP", envir = .GlobalEnv): object 'SP' not found
getEvents(apiary)
#> Error in eval(expr, envir, enclos): object 'apiary' not found